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Study Confirms Potato Emerged From 9-Million-Year-Old Tomato Hybrid

Pinpointing SP6A and IT1 as the drivers of tuber formation opens avenues in tomato bioengineering alongside seed-propagated potato breeding.

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People harvest potatoes near Celendín, Peru.
Many different potato varieties are endemic to Peru.
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Overview

  • A comprehensive genomic analysis published July 31 in Cell shows every potato species carries a balanced mix of ancestral tomato and Etuberosum DNA pointing to a single hybridization event 8–9 million years ago.
  • Researchers identified SP6A from the tomato lineage and IT1 from Etuberosum as the essential genetic switches that enabled the formation of edible underground tubers.
  • The origin of tubers coincided with the rapid uplift of the Andes mountains, giving the proto-potato a survival advantage in cold, dry high-altitude habitats and triggering an explosion of new species.
  • Building on these findings, teams are engineering tomato plants to produce tubers and developing diploid, seed-propagated potato lines with simplified genomes to boost disease resistance.
  • Insights into the potato’s hybrid origin offer a roadmap to reintroduce lost beneficial traits in modern cultivars and strengthen the crop’s resilience in the face of climate challenges.