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Australian Study Identifies High Coronavirus Co-Infection Rates in Juvenile Flying Foxes

Researchers say monitoring co-infections in young bats from March to July could help anticipate coronavirus evolution

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Overview

  • Researchers collected and genomically analyzed over 2,500 fecal samples from black and grey-headed flying foxes at five sites along Australia’s eastern seaboard.
  • Viral shedding peaked in juvenile and sub-adult bats between March and July, aligning with weaning and the onset of maturity.
  • Six coronaviruses from the nobecovirus subclass were identified, including three newly discovered strains that currently show no known human infectivity.
  • High rates of multiple coronavirus infections in young bats create opportunities for viral recombination, a key precursor to emergence of new variants.
  • The study proposes a surveillance model targeting seasonal co-infections to predict and mitigate potential spillover risks before they threaten human health.