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ALS Study Identifies 39-Gene Vulnerability Signature and Cross-Species Biomarkers

Resilient ocular motor neurons maintain high neuroprotective gene levels, pointing to strategies to fortify susceptible cells.

The discovery of distinct basal and induced gene activity in different nerve cells opens up new possibilities for treatment. Credit: Neuroscience News
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Overview

  • Genome Research published the open-access study online Aug 19–20, detailing LCM-seq and single-molecule FISH across four motor neuron populations in SOD1G93A mice.
  • Ocular motor neurons altered few transcripts during disease and instead showed high baseline expression of En1, Pvalb, Cd63, and Gal associated with resistance.
  • Vulnerable neurons mounted mixed responses, activating pro-apoptotic pathways (Atf4, Nupr1, Ddit3, Penk) alongside pro-regenerative genes (Atf3, Sprr1a, Vgf, Ina, Fgf21, Gap43, Adcyap1, Mt1) that ultimately failed to prevent degeneration.
  • A meta-analysis across four rodent Sod1 datasets defined a shared vulnerability code of 39 genes that captures mechanisms common to susceptible motor neurons.
  • Machine learning flagged dysregulation of VGF, INA, and PENK as strong predictors across species and SOD1 mutations, proposing biomarker candidates that now warrant validation in human cohorts.