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AI Discovers Thousands of Novel Antimicrobial Peptides in Ancient Archaea

The approach could overcome antibiotic resistance by tapping Archaea as a source of structurally novel antimicrobial peptides.

Overview

  • Using an improved AI tool called APEX 1.1, researchers scanned proteins from 233 Archaea species and identified over 12,000 candidate peptides dubbed archaeasins
  • Laboratory tests of 80 archaeasins showed that 93% inhibited at least one drug-resistant bacterial strain in vitro
  • Three archaeasins advanced to animal models where a single dose halted infection and one matched the efficacy of the last-resort antibiotic polymyxin B
  • Chemical analyses suggest archaeasins kill bacteria by disrupting internal electrical signaling rather than targeting cell membranes
  • The team intends to refine AI-driven structural predictions and assess long-term safety and efficacy as a prelude to human clinical trials